After you extract several groups of genes with statistical tools, Annotation Analysis Plug-in is useful to interpret them in biological context.

The keyword enrichment analysis tool searches a column of the annotation table, and reports a list of enriched keywords with p-values. If you run on the column of Gene Ontology (GO) terms, it works as GO enrichment analysis tool. You can, moreover, apply to various columns like protein domain, regulatory sequence, related pathway, cytoband and so on.

The pathway view of Subio Platform visualizes pathway objects. Although all users can import and export any pathway objects without plug-ins, the pathway edit tool is required to create a new pathway object or to edit existing ones.

The miRNA-target analysis tool extracts genes which are experimentally validated or informatically predicted target genes and showing anti-correlated patterns against the selected miRNAs. Of course, you can search the opposite way, from a set of genes showing similar expression patterns to possible controller miRNAs. (This tool works well with Genomic Analysis Plug-in)